SubtiBank SubtiBank
yvaA [2017-05-09 15:36:35]
You are currently viewing an outdated version of SubtiWiki. Please use the newest version!

yvaA [2017-05-09 15:36:35]

scyllo-inositol dehydrogenase, general stress protein
locus
BSU33530
pI
5.46
mw
39.95 kDa
protein length
358 aa Sequence Blast
gene length
1074 bp Sequence Blast
function
unknown
product
scyllo-inositol dehydrogenase
essential
no
synonyms
yvaA
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 2|Metabolism] → [category|SW 2.2|Carbon metabolism] → [category|SW 2.2.2|Utilization of specific carbon sources] → [category|SW 2.2.2.16|Utilization of inositol]
  • [category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.1|General stress proteins (controlled by SigB)]

    • Gene

    Coordinates
    3,444,329 → 3,445,405

    The protein

    Protein family

  • gfo/idh/mocA family (according to Swiss-Prot)

    • Paralogous protein(s)

  • [protein|03BE6DA854612B3F6741E0E167AB310F0DE96285|YfiI], [protein|29DAF5343A42EAD8DB97925FE7D049410F7B7FCA|NtdC], [protein|942BAE9FA023DFCA06B6D26A856A72F2979E23FA|YrbE], [protein|484D17480DFAD3667E0EBC6D38854A7546A8DB46|YteT], [protein|search|IolU], [protein|93C1DF93CAFC5AE726523A91A3BA7470017FF6DC|IolG]

    • Structure

  • [PDB|3GFG]

    • Expression and Regulation

    Operons

    genes
    [gene|7DFE74C751A67CCC84579D52005E1399B0A10166|iolW]
    description
    [pubmed|22383849]

    sigma factors

  • [protein|580011DE5DC40EC9E7E0512791D328FAA010DCB8|SigB]: sigma factor, [Pubmed|15805528], in [regulon|580011DE5DC40EC9E7E0512791D328FAA010DCB8|SigB regulon]

    • regulation

  • induced by stress ([protein|580011DE5DC40EC9E7E0512791D328FAA010DCB8|SigB]) [Pubmed|15805528]
    • view in new tab

    Biological materials

    Mutant

  • MGNA-A443 (iolU::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/443 NBRP B. subtilis, Japan]

    • References

  • 15805528,20133360,24325193